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1. interface-hydrophobicity interface-hydrophobicity Public

   Calculates hydrophobicity at the interface of a protein-protein interaction (PPI). Useful to compare performance of different types of PPIs in MaSIF or other docking algorithms.

   2

2. CNN-iPSC CNN-iPSC Public

   Project with Marta Perez-Alcantara and Agata Wesolowska-Andersen

   R 1 2

3. hairpin-loop hairpin-loop Public

   Returns a summary of hairpin traits. Takes a list of hairpin PDBs (peptides with a loop region in the middle) as input and checks whether they have desired traits.

   Python 1

4. methylation methylation Public

   Forked from mperalc/methylation

   850k methylation (EPIC) Illumina pipeline

   R

5. Basset Basset Public

   Forked from davek44/Basset

   Convolutional neural network analysis for predicting DNA sequence activity.

   Jupyter Notebook

6. SNP-select SNP-select Public

   Forked from vdkoen/SNP-select

   SNP-select is a pipeline for the identification of a minimal snp maker set, to distinguish between the input samples. Pipeline is designed on GBS datasets. Therefore it will work with both wgs- and…

   Python