Skip to content
@ImagingDataCommons

Imaging Data Commons

Welcome to the official GitHub organization for the Imaging Data Commons!

About IDC

The National Cancer Institute Imaging Data Commons (IDC) is a cloud-based repository of publicly available cancer imaging data, co-located with analysis and exploration tools. As part of the NCI Cancer Research Data Commons (CRDC), IDC provides researchers with:

  • Access to >95 TB of cancer imaging data, including radiology, brightfield, and fluorescence microscopy images
  • Image-derived data such as annotations, segmentations, and quantitative measurements
  • Accompanying clinical data
  • Cloud-based infrastructure for data exploration and analysis

Key Features

  • Free and open access: No registration or access requests required
  • Commercial-friendly licensing: >95% of data covered by CC-BY license
  • Cloud-based: Data available from both Google and AWS public buckets
  • Standardized data: All images and derived data harmonized into DICOM format

Getting Started

To begin using IDC:

Repositories

Our GitHub organization hosts various repositories to support IDC users:

  • IDC-Tutorials: Self-guided notebook tutorials to help you get started with IDC
  • idc-index: python package for searching, downloading, and simplifying access to the data in IDC
  • SlicerIDCBrowser: 3D Slicer extension providing access to IDC data
  • idc-wsi-conversion: PixelMed Toolkit based scripts used in IDC for converting vendor-specific slide microscopy formats into DICOM WSI representation

We are also maintianing a number of repositories containing popular tools that we use in IDC, but which are of general utility:

Support

If you need assistance or have questions, please:

  • Open a new topic in the IDC User Forum (preferred)
  • Send us a message at support at canceridc dot dev

We're excited to support your cancer imaging research with IDC!

Pinned Loading

  1. idc-claude-skill idc-claude-skill Public

    Natural language interface to NCI Imaging Data Commons

    19 7

  2. IDC-Tutorials IDC-Tutorials Public

    Self-guided notebook tutorials to help get started with IDC

    Jupyter Notebook 46 21

  3. idc-index idc-index Public

    Python package to simplify access to the data available in NCI Imaging Data Commons

    Python 20 10

  4. highdicom highdicom Public

    High-level DICOM abstractions for the Python programming language

    Python 222 51

  5. slim slim Public

    Interoperable web-based DICOM slide microscopy viewer and annotation tool

    TypeScript 158 49

  6. SlicerIDCBrowser SlicerIDCBrowser Public

    A 3D Slicer extension to support access to the content of NCI Imaging Data Commons

    Python 7 6

Repositories

Showing 10 of 72 repositories
  • idc-nlst-plus Public
    ImagingDataCommons/idc-nlst-plus’s past year of commit activity
    Jupyter Notebook 0 MIT 1 0 0 Updated Mar 11, 2026
  • slim Public

    Interoperable web-based DICOM slide microscopy viewer and annotation tool

    ImagingDataCommons/slim’s past year of commit activity
    TypeScript 158 Apache-2.0 49 69 (1 issue needs help) 0 Updated Mar 11, 2026
  • dicom-microscopy-viewer Public

    Web-based DICOM slide microscopy viewer library

    ImagingDataCommons/dicom-microscopy-viewer’s past year of commit activity
    JavaScript 120 MIT 48 12 2 Updated Mar 11, 2026
  • idc-index-data Public

    Python package providing the index to query and download data hosted by the NCI Imaging Data Commons

    ImagingDataCommons/idc-index-data’s past year of commit activity
    Python 1 MIT 4 4 0 Updated Mar 10, 2026
  • conversion_mirax_dicom Public

    Code for the conversion of BMDeep dataset in MRXS format to DICOM format

    ImagingDataCommons/conversion_mirax_dicom’s past year of commit activity
    Python 0 BSD-3-Clause 0 0 0 Updated Mar 10, 2026
  • s5cmd-python-distributions Public

    This project provides the infrastructure to build s5cmd Python wheels.

    ImagingDataCommons/s5cmd-python-distributions’s past year of commit activity
    Python 5 MIT 1 0 0 Updated Mar 10, 2026
  • idc-index Public

    Python package to simplify access to the data available in NCI Imaging Data Commons

    ImagingDataCommons/idc-index’s past year of commit activity
    Python 20 MIT 10 34 1 Updated Mar 9, 2026
  • nlst-sybil-connectome Public

    Interactive network visualization of tumor-level similarity between 289 NLST lung cancer patients, comparing embeddings from 9 foundation models applied to tumor regions defined by NLST-Sybil annotations. Built on NCI Imaging Data Commons.

    ImagingDataCommons/nlst-sybil-connectome’s past year of commit activity
    Jupyter Notebook 4 Apache-2.0 0 0 0 Updated Mar 9, 2026
  • etl_flow Public

    (CORE REPO)

    ImagingDataCommons/etl_flow’s past year of commit activity
    Python 4 Apache-2.0 3 9 1 Updated Mar 9, 2026
  • IDC-API Public Forked from isb-cgc/ISB-CGC-API

    Google Endpoints API providing programmatic access (CORE REPO)

    ImagingDataCommons/IDC-API’s past year of commit activity
    Python 0 Apache-2.0 4 3 0 Updated Mar 5, 2026

Top languages

Loading…

Most used topics

Loading…