<?xml version="1.0"?>
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
  <modelVersion>4.0.0</modelVersion>
  <parent>
    <artifactId>biojava</artifactId>
    <groupId>org.biojava</groupId>
    <version>5.0.0-alpha11</version>
  </parent>
  <artifactId>biojava-modfinder</artifactId>
  <name>biojava-modfinder</name>
  <url>http://www.biojava.org</url>

  <licenses>
    <license>
      <name>GNU LGPL v2</name>
      <url>http://www.gnu.org/licenses/old-licenses/lgpl-2.1.txt</url>
      <distribution>repo</distribution>
    </license>
  </licenses>

  <properties>  	   
  	  	<project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
		<project.build.targetEncoding>UTF-8</project.build.targetEncoding> 
  </properties>
  <dependencies>
    <dependency>
      <groupId>junit</groupId>
      <artifactId>junit</artifactId>
      <scope>test</scope>
    </dependency>
    <dependency>
    	<groupId>org.biojava</groupId>
    	<artifactId>biojava-structure</artifactId>
    	<version>5.0.0-alpha11</version>
    	<type>jar</type>
    	<scope>compile</scope>
    </dependency>
		<!-- logging dependencies (managed by parent pom, don't set versions or scopes here) -->
		<dependency>
        	<groupId>org.slf4j</groupId>
        	<artifactId>slf4j-api</artifactId>
    	</dependency>
    	<!-- binding for log4j2, scope=runTime set in parent pom -->
 		<dependency>
    		<groupId>org.apache.logging.log4j</groupId>
    		<artifactId>log4j-slf4j-impl</artifactId>
  		</dependency>
  		<dependency>
    		<groupId>org.apache.logging.log4j</groupId>
    		<artifactId>log4j-api</artifactId>
  		</dependency>
  		<dependency>
    		<groupId>org.apache.logging.log4j</groupId>
    		<artifactId>log4j-core</artifactId>
  		</dependency>			
  </dependencies>
  <build>
  <plugins>

			<!-- Excluding demo package is required for avoiding namespace clashes (demo package is in all modules) for signing the jar. See issue #387 -->
            <plugin>
                <groupId>org.apache.maven.plugins</groupId>
                <artifactId>maven-jar-plugin</artifactId>
                <configuration>
                    <excludes>
                        <exclude>demo/**</exclude>
                    </excludes>
                </configuration>
            </plugin>
  
            <plugin>
                <groupId>org.apache.maven.plugins</groupId>
                <artifactId>maven-compiler-plugin</artifactId>
                <configuration>
                    <debug>true</debug>
                </configuration>
            </plugin>
        </plugins>
  </build>
</project>
