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BioJava is open source

It's hosted, developed, and maintained on GitHub.

View the GitHub project

Protein Structure Modules

provide an API that allow to

  • Maintain local installations of PDB
  • Load structures and manipulate them
  • Perform standard analysis such as sequence and structure alignments
  • Visualize structures

Biological Sequences

BioJava allows to

  • Perform basic operations on biological sequences
  • Read and Write popular sequence file formats
  • Translate DNA sequences into protein sequences

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